Hello, I am

Jacob Clarke
I am a fourth-year medical student, and I am passionate about improving patient care through clinical integration with technology.

Education

St. Louis University School of Medicine
MD Candidate

Aug 2018 - Present

      Brigham Young University
      BS of Molecular Biology

      Aug 2013 - Dec 2013, Jan 2016 - Aug 2018

          Publications

          Clarke J, Nakashima K. (2022, March). Developing an Online Platform for Clinic Volunteer Coordination. To be Presented at Society of Student Run Free Clinics 2022 Annual Conference

          Zhang JK, Patel M, Patel N, Clarke J, Almajali M, Alexopoulos G. Clinical and Radiographic Biomarkers of Delayed Cerebral Ischemia following Aneurysmal Subarachnoid Hemorrhage. Weill Cornell Medicine Neurological Research Symposium, New York City, NY. Jan 2021

          Joshua J. Nelson, Seth R. Stapley, Chris S. Finuf, Elizabeth Anderson, Jacob Clarke, Jordan T. Yorgason, Scott C. Steffensen. Effects of Cocaine on Spontaneous Dopamine Release Varies across Striatal Regions Poster Presented at: Mary-Lou Fulton Conference. 2018 Apr 12; Provo, UT.


          Experiences

          Head Developer
          Infectious Disease Data Repository

          November 2020 - Present

          • Leading multiple large scale web scraping projects related to COVID19 and the impact of the pandemic.

            St. Louis University School of Medicine

            May 2021 - Present

            • Analyzed the Vaccine Adverse Events Reporting System (VAERS) with AI natural language processing.

            • Created an AI deep learning model to predict vaccine type from symptom text with 82% accuracy (At https://vaers.jacobaclarke.com).

            • Research is ongoing, and I am currently preparing a manuscript submission.

              Signup Clinic

              Oct 2020 - Present

              • Developed software to manage more than 100 weekly volunteer sign-ups at student-run clinics.

              • This experience showcases my ability to build technical solutions for clinical problems.

              • The clinic leadership created a new "Distinction in Service" award to recognize my unique contributions.

                Survey Developer
                Saint Louis University School of Medicine

                September 2021 - Present

                • After Saint Louis University experienced multiple suicides, I partnered with the Office of Student Affairs to build an early alert system that uses weekly SMS surveys to screen students for depression.

                • Designed the system to provide resources to students and send emergency notifications to faculty when patients are flagged as high risk by the surveys.

                  Saint Louis University School of Medicine

                  Oct 2020 - Present

                  • Built an application to help students understand disease hierarchy by building personal ontology maps of diseases.

                  • Piloted with our internal medicine clerkship program with several student cohorts.

                    Research Assistant
                    Brigham Young University

                    Jan 2016 - Jan 2017

                    • Performed immunohistochemical staining, dot blot staining, and gold antibody labeling of cells.

                      Children's Choir Leader
                      The Church of Jesus Christ of Latter-day Saints

                      June 2019 - Present

                      • Taught weekly lessons for a choir of more than 20 children.

                      • Organized virtual and recorded meetings during the pandemic.

                      • Led two live performances and one virtual performance.

                      • Served families that experienced hardship by tutoring children, visiting their homes, and bringing holiday gifts.

                        Volunteer Pianist
                        Miscelaneous

                        Aug 2018 - Present

                        • Played piano at multiple locations, including [1] a memorial service for anatomy lab body donors, [2] Saint Louis University’s hematology/oncology infusion center, and [3] church services.

                        • The piano is a creative outlet that helps me build resilience.

                          Service Mission
                          The Church of Jesus Christ of Latter-day Saints

                          January 2014 - December 2015

                          • Taught classes about religion and participated in several service projects.

                          • Learned to speak advanced German through daily study and a commitment to speak only German from 9 AM to 9 PM each day.

                          • Hosted English and German courses for immigrants who were seeking work.

                            Research Assistant
                            Saint Louis University School of Medicine

                            Sep 2021 - Present

                            • Under the supervision of the Saint Louis University internal medicine program director, I am designing a resident application ranking system.

                            • I am processing data from ERAS application packets to help identify unique applicants through natural language processing and machine learning.

                              Student Researcher
                              Washington University School of Medicine

                              Oct 2018 - March 2020

                              • Published a manuscript about cancer survival disparities by race and geographic location in an AACR journal (Cancer Epidemiology, Biomarkers & Prevention).

                              • Performed Kaplan Meier and Cox proportional hazard regression analyses using R and Python.

                              • Having witnessed healthcare disparities in St. Louis, I was proud to advocate for my patients through this research.

                              • Established a new immunohistochemical staining protocol.

                              • Used Python image processing to programmatically identify the number of positive staining cells per sample.

                              • Evaluator Feedback: "Jacob performed exceptionally well during his research rotation. He used his programming skills to help develop a novel algorithm for data analysis, and independently performed molecular biology experiments essential to our research."

                                Research Assistant
                                Brigham Young Steffensen Lab

                                Aug 2017 - Apr 2018

                                • Troubleshot a new protocol for isolation of microglia from the mouse brain.

                                • Trained other students in intracranial viral injections and transcardiac perfusions in rats and mice.

                                • Performed imaging on mice to check the response of dopamine neuron firing rates to alcohol incubation dose.

                                  Ballet Accompanist
                                  BYU Ballet Department

                                  Dec 2017 - Jun 2018

                                  • Worked as a ballet accompanist, playing for senior-level university courses.

                                  • The ballet classes involved song improvisation and style adaptation; they required a non-repeating repertoire lasting up to five hours.

                                    Mechanic Certification Instructor
                                    Provo Bicycle Collective

                                    Dec 2017 - Jun 2018

                                    • Started as a volunteer by repairing used bikes to donate to the community.

                                    • As an employee, I taught mechanic certification courses at the local juvenile detention center to improve their residents' chances of finding work after release.

                                    • Led multiple volunteer nights at the bicycle shop.

                                      Teaching Assistant
                                      Brigham Young University

                                      Aug 2017 - Dec 2017

                                      • Held weekly office hours to teach students.

                                      • Taught multiple exam reviews.

                                      • Developed a deeper interest in medical education.


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